jdistlib.math

Class VectorMath

java.lang.Object

jdistlib.math.VectorMath

public class VectorMath
extends java.lang.Object

Author:

Roby Joehanes

Constructor Summary

Constructors

Constructor and Description
VectorMath()

Method Summary

Modifier and Type	Method and Description
static boolean	allEq(double[] e, double v)
static boolean	allEqual(double[] e, double[] v)
static boolean	allEqual(double[] a, double[] b, double tol)
static boolean	allEqualScaled(double[] a, double[] b, double tol)
static boolean	allFinite(double[] e)
static boolean	allGt(double[] e, double v)
static boolean	allLt(double[] e, double v)
static double[]	as_numeric(java.util.Collection<java.lang.String> ll)
static double[]	cumsum(double[] e)
static int[]	cumsum(int[] e)
static double[]	diff(double[] e)
static double[]	diff(double[] e, int lag)
static double[]	diff(double[] e, int lag, int order)
static double	iqr(double[] e)
static boolean	isEqual(double a, double b, double tol)
static boolean	isEqualScaled(double a, double b, double tol)
static boolean	isSorted(double[] a, boolean ascending)
static double	max(double[] e)
static double	mean(double[] e)
static double	median(double[] e) Get the median
static double	min(double[] e)
static double[]	pmax(double[] a, double[] b)
static double[]	pmin(double[] a, double[] b)
static double	quantile(double[] sortedData, double quantile) Find quantile given a sorted data of array (Definition 7)
static double[]	quantile(double[] sortedData, double[] quantile) Find quantile given a sorted data of array (Definition 7)
static double	quantile0(double[] e, double quantile) Find quantile in an array (Definition 7).
static double[]	quantile0(double[] e, double[] quantile) Find quantile in an array (Definition 7).
static double[]	range(double[] e)
static double	sd(double[] e)
static double[]	standardize(double[] x) Standardize the value in x (i.e., (x - mean(x)) / sd(x))
static double	sum_kahan(double[] e)
static double	sum(double[] e)
static double	sum(java.util.Map<java.lang.String,java.lang.Integer> e)
static double[]	summary(double[] e) Return summary statistics
static java.util.Map<java.lang.String,java.lang.Integer>	table(double[] e)
static <T> java.util.Map<java.lang.String,java.lang.Integer>	table(T[] e)
static double[]	vabs(double[] e)
static double	var(double[] e)
static double[]	vcomp(double[] e)
static double[]	vdiv(double[] a, double b)
static double[]	vdiv(double[] a, double[] b)
static double[]	vdiv(double a, double[] b)
static double[]	vexp(double[] e)
static double[]	vlog(double[] e)
static double[]	vlog1pComps(double[] e)
static double[]	vmin(double[] e)
static double[]	vmin(double[] a, double b)
static double[]	vmin(double[] a, double[] b)
static double[]	vmin(double a, double[] b)
static double[]	vplus(double[] a, double b)
static double[]	vplus(double[] a, double[] b)
static double[]	vplus(double a, double[] b)
static double[]	vpow(double[] x, double e)
static double[]	vpow(double[] x, double[] e)
static double[]	vpow(double x, double[] e)
static double[]	vpow(double x, int[] e)
static double[]	vsignif(double[] e, int digits)
static double[]	vsq(double[] a)
static double[]	vtimes(double[] a, double b)
static double[]	vtimes(double[] a, double[] b)
static double[]	vtimes(double a, double[] b)
static int	which_max(double[] e)
static int	which_min(double[] e)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

VectorMath

public VectorMath()

Method Detail

vpow

public static final double[] vpow(double x,
                                  double[] e)

vpow

public static final double[] vpow(double[] x,
                                  double e)

vpow

public static final double[] vpow(double[] x,
                                  double[] e)

vpow

public static final double[] vpow(double x,
                                  int[] e)

vplus

public static final double[] vplus(double[] a,
                                   double[] b)

vplus

public static final double[] vplus(double a,
                                   double[] b)

vplus

public static final double[] vplus(double[] a,
                                   double b)

vmin

public static final double[] vmin(double[] e)

vmin

public static final double[] vmin(double[] a,
                                  double[] b)

vmin

public static final double[] vmin(double[] a,
                                  double b)

vmin

public static final double[] vmin(double a,
                                  double[] b)

vtimes

public static final double[] vtimes(double a,
                                    double[] b)

vtimes

public static final double[] vtimes(double[] a,
                                    double b)

vtimes

public static final double[] vtimes(double[] a,
                                    double[] b)

vsq

public static final double[] vsq(double[] a)

vdiv

public static final double[] vdiv(double[] a,
                                  double b)

vdiv

public static final double[] vdiv(double a,
                                  double[] b)

vdiv

public static final double[] vdiv(double[] a,
                                  double[] b)

vcomp

public static final double[] vcomp(double[] e)

vabs

public static final double[] vabs(double[] e)

vexp

public static final double[] vexp(double[] e)

vlog

public static final double[] vlog(double[] e)

vlog1pComps

public static final double[] vlog1pComps(double[] e)

vsignif

public static final double[] vsignif(double[] e,
                                     int digits)

diff

public static final double[] diff(double[] e,
                                  int lag,
                                  int order)

diff

public static final double[] diff(double[] e,
                                  int lag)

diff

public static final double[] diff(double[] e)

allFinite

public static final boolean allFinite(double[] e)

allLt

public static final boolean allLt(double[] e,
                                  double v)

allGt

public static final boolean allGt(double[] e,
                                  double v)

allEq

public static final boolean allEq(double[] e,
                                  double v)

allEqual

public static final boolean allEqual(double[] e,
                                     double[] v)

quantile

public static final double quantile(double[] sortedData,
                                    double quantile)

Find quantile given a sorted data of array (Definition 7)

Parameters:

sortedData - This data is assumed to be presorted! Use quantile0 if you want to use unsorted data!

quantile - must be 0 <= quantile <= 1

Returns:

quantile value

quantile

public static final double[] quantile(double[] sortedData,
                                      double[] quantile)

Find quantile given a sorted data of array (Definition 7)

Parameters:

sortedData - This data is assumed to be presorted!

quantile -

Returns:

quantile values

quantile0

public static final double quantile0(double[] e,
                                     double quantile)

Find quantile in an array (Definition 7). Data is assumed to be unsorted

Parameters:

e -

quantile - must be 0 <= quantile <= 1

Returns:

quantile value

quantile0

public static final double[] quantile0(double[] e,
                                       double[] quantile)

Find quantile in an array (Definition 7). Data is assumed to be unsorted

Parameters:

e -

quantile - must be 0 <= quantile <= 1

Returns:

quantile values

mean

public static final double mean(double[] e)

summary

public static final double[] summary(double[] e)

Return summary statistics

Parameters:

e -

Returns:

an array of 6 elements: Min, Q1, Median, Mean, Q3, Max

median

public static final double median(double[] e)

Get the median

Parameters:

e - does not need to be sorted

Returns:

median value

sd

public static final double sd(double[] e)

var

public static final double var(double[] e)

sum

public static final double sum(double[] e)

sum_kahan

public static final double sum_kahan(double[] e)

sum

public static final double sum(java.util.Map<java.lang.String,java.lang.Integer> e)

standardize

public static final double[] standardize(double[] x)

Standardize the value in x (i.e., (x - mean(x)) / sd(x))

Parameters:

x -

Returns:

standardized values

table

public static final java.util.Map<java.lang.String,java.lang.Integer> table(double[] e)

table

public static final <T> java.util.Map<java.lang.String,java.lang.Integer> table(T[] e)

as_numeric

public static final double[] as_numeric(java.util.Collection<java.lang.String> ll)

cumsum

public static final double[] cumsum(double[] e)

cumsum

public static final int[] cumsum(int[] e)

max

public static final double max(double[] e)

min

public static final double min(double[] e)

which_max

public static final int which_max(double[] e)

which_min

public static final int which_min(double[] e)

pmax

public static final double[] pmax(double[] a,
                                  double[] b)

pmin

public static final double[] pmin(double[] a,
                                  double[] b)

range

public static final double[] range(double[] e)

iqr

public static final double iqr(double[] e)

isEqual

public static final boolean isEqual(double a,
                                    double b,
                                    double tol)

isEqualScaled

public static final boolean isEqualScaled(double a,
                                          double b,
                                          double tol)

allEqual

public static final boolean allEqual(double[] a,
                                     double[] b,
                                     double tol)

allEqualScaled

public static final boolean allEqualScaled(double[] a,
                                           double[] b,
                                           double tol)

isSorted

public static final boolean isSorted(double[] a,
                                     boolean ascending)